This is how I envisage it would be done:
Below is the image that is generated from the Network program (at the bottom of the page is the code the program to produce the image). Note that when the code shows "Equivalent taxa", the circles are larger on the image.
Is it possible to generate a spatially-constructed image from the code below
through ASP - or possibly via another scripting language e.g. ActionScript?
Fom my limited experience of ASP, it would be hard to calculate the xy coordinates,
position the circles so that they don't overlap, and also draw lines between
them.
The closest I have seen to asp drawing is in http://www.asppdf.com/manual_04.html
- although there may well be more capabale components out there.
=================================================
Results of file C:DemoYSTR.rdf with Epsilon=0
Criterion for generated median vectors : Connection cost.
Equivalent taxa :
Tax. JPQQQQ with tax. VPQQQQ
Tax. GFQQQQ with tax. IIHQQQ
Tax. GFQQQQ with tax. P9QQQQ
Tax. Y1QQQQ with tax. Y2QQQQ
Final links :
Link 1 0 Seq. JPQQQQ with Seq. WWQQQQ, mutations at BBBBBa BBBBBb CCCCCa AAQQQa
AAQQQb AAQQQc AAQQQd DDDDDa FFFFFa FFFFFb HHHHHa HHHHHb IIIIIa JJJJJa AAJJJb
KKKKKa KKKKKb MMMMMb MMMMMc MMMMMd OOOOOa PPPPPa RRRRRa RRRRRb RRRRRc SSSSSb
UUUUUa WWWWWa WWWWWb WWWWWc XXXXXa YYYYYa YYYYYb ZZZZZa ZZZZZb ZZAAAa ZZAAAb
ZZDDDa ZEEEEa ZEEEEb ZEEEEc ZZGGGa ZZHHHa ZZIIIa ZZJJJa ZZKKKa ZZKKKb
Link 2 0 Seq. JPQQQQ with Seq. mv 3, mutations at GGGGGa XXXXXb ZZBBBa
Link 3 0 Seq. CMQQQQ with Seq. mv 4, mutations at RRRRRb TTTTTa TTTTTb TTTTTc
ZZZZZc ZZFFFb
Link 4 0 Seq. GCQQQQ with Seq. mv 1, mutations at QQQQQa
Link 5 0 Seq. LKQQQQ with Seq. mv 4, mutations at DDDDDb EEEEEa AAJJJa MMMMMa
OOOOOa PPPPPb ZZFFFa
Link 6 0 Seq. GFQQQQ with Seq. mv 1, mutations at EEEEEa MMMMMb TTTTTb YYYYYb
YYYYYc ZZCCCa ZZFFFa ZZHHHb
Link 7 0 Seq. ULQQQQ with Seq. mv 1, mutations at LLLLLa UUUUUa UUUUUb ZZBBBb
Link 8 0 Seq. Y1QQQQ with Seq. mv 2, mutations at AAAAAa
Link 9 0 Seq. mv 1 with Seq. mv 2, mutations at FFFFFc TTTTTa
Link 10 0 Seq. mv 2 with Seq. mv 3, mutations at CCCCCa HHHHHc SSSSSa XXXXXc
YYYYYb
Link 11 0 Seq. mv 3 with Seq. mv 4, mutations at RRRRRc YYYYYc
**************************************************
Frequ. of taxon JPQQQQ : 1
Frequ. of taxon CMQQQQ : 1
Frequ. of taxon WWQQQQ : 1
Frequ. of taxon VPQQQQ : 1
Frequ. of taxon GCQQQQ : 1
Frequ. of taxon LKQQQQ : 1
Frequ. of taxon GFQQQQ : 1
Frequ. of taxon IIHQQQ : 1
Frequ. of taxon P9QQQQ : 1
Frequ. of taxon ULQQQQ : 1
Frequ. of taxon Y1QQQQ : 1
Frequ. of taxon Y2QQQQ : 1
Frequ. of taxon mv 1 : 0
Frequ. of taxon mv 2 : 0
Frequ. of taxon mv 3 : 0
Frequ. of taxon mv 4 : 0
**************************************************
Weight of character AAAAAa : 10
Weight of character BBBBBa : 10
Weight of character BBBBBb : 10
Weight of character CCCCCa : 10
Weight of character AAQQQa : 10
Weight of character AAQQQb : 10
Weight of character AAQQQc : 10
Weight of character AAQQQd : 10
Weight of character DDDDDa : 10
Weight of character DDDDDb : 10
Weight of character EEEEEa : 10
Weight of character FFFFFa : 10
Weight of character FFFFFb : 10
Weight of character FFFFFc : 10
Weight of character GGGGGa : 10
Weight of character HHHHHa : 10
Weight of character HHHHHb : 10
Weight of character HHHHHc : 10
Weight of character IIIIIa : 10
Weight of character JJJJJa : 10
Weight of character AAJJJa : 10
Weight of character AAJJJb : 10
Weight of character KKKKKa : 10
Weight of character KKKKKb : 10
Weight of character LLLLLa : 10
Weight of character MMMMMa : 10
Weight of character MMMMMb : 10
Weight of character MMMMMc : 10
Weight of character MMMMMd : 10
Weight of character OOOOOa : 10
Weight of character PPPPPa : 10
Weight of character PPPPPb : 10
Weight of character QQQQQa : 10
Weight of character RRRRRa : 10
Weight of character RRRRRb : 10
Weight of character RRRRRc : 10
Weight of character SSSSSa : 10
Weight of character SSSSSb : 10
Weight of character TTTTTa : 10
Weight of character TTTTTb : 10
Weight of character TTTTTc : 10
Weight of character UUUUUa : 10
Weight of character UUUUUb : 10
Weight of character WWWWWa : 10
Weight of character WWWWWb : 10
Weight of character WWWWWc : 10
Weight of character XXXXXa : 10
Weight of character XXXXXb : 10
Weight of character XXXXXc : 10
Weight of character YYYYYa : 10
Weight of character YYYYYb : 10
Weight of character YYYYYc : 10
Weight of character ZZZZZa : 10
Weight of character ZZZZZb : 10
Weight of character ZZZZZc : 10
Weight of character ZZAAAa : 10
Weight of character ZZAAAb : 10
Weight of character ZZBBBa : 10
Weight of character ZZBBBb : 10
Weight of character ZZCCCa : 10
Weight of character ZZDDDa : 10
Weight of character ZEEEEa : 10
Weight of character ZEEEEb : 10
Weight of character ZEEEEc : 10
Weight of character ZZFFFa : 10
Weight of character ZZFFFb : 10
Weight of character ZZGGGa : 10
Weight of character ZZHHHa : 10
Weight of character ZZHHHb : 10
Weight of character ZZIIIa : 10
Weight of character ZZJJJa : 10
Weight of character ZZKKKa : 10
Weight of character ZZKKKb : 10
=================================================